EZsplit

EZsplit helps users in the fast creation of a nucleotide dataset to submit to EZpipe.

It was developed to automate the download process from data banks. The tool creates different fasta files, i.e. one for each mitochondrial Protein Coding Gene starting from Genbank downloaded sequences. Adding your sequences to the output is therefore the next step before the EZpipe input submission.

Use EZsplit it according to the following instructions:

1. Download from Genbank the multpiple species Conding Sequences features in fasta format. Please do not change its format (.txt).
2. Download from Genbank the corresponding complete record file in TinySeq XML format. Please do not change this extensnion (.xml).
3. Zip both files (the .txt and the .xml) in a common archive using .zip, .rar, .gz, .tar or .7z format.
4. Upload the compressed file using the Upload button

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Your data will be:

1. Splitted in different fasta files (one for each mitochondrial gene);
2. Checked to understand if all the Protein Coding Genes were correctly splitted for each species. This information will be summed up in a .csv file.

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Example of input file preparation



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Download an input example
Download an output example

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Job name*

Select a .zip, .rar, .tar, .gz, .7z file
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*Useful to organize your processed jobs. If not provided, a random ID will be created.